Publications in collaboration with researchers from Harvard University (16)

2024

  1. Data Contamination Report from the 2024 CONDA Shared Task

    CONDA 2024 - 1st Data Contamination Workshop, Proceedings of the Workshop

2023

  1. 3D Domain Adaptive Instance Segmentation via Cyclic Segmentation GANs

    IEEE Journal of Biomedical and Health Informatics, Vol. 27, Núm. 8, pp. 4018-4027

  2. Current Progress and Challenges in Large-Scale 3D Mitochondria Instance Segmentation

    IEEE Transactions on Medical Imaging, Vol. 42, Núm. 12, pp. 3956-3971

2021

  1. AxonEM Dataset: 3D Axon Instance Segmentation of Brain Cortical Regions

    Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics)

  2. NucMM Dataset: 3D Neuronal Nuclei Instance Segmentation at Sub-Cubic Millimeter Scale

    Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics)

2020

  1. MitoEM Dataset: Large-Scale 3D Mitochondria Instance Segmentation from EM Images

    Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics)

2019

  1. Chromatic serial multiphoton microscopy for high-content multiscale analysis of large brain volumes

    Optics and the Brain - Proceedings Biophotonics Congress: Optics in the Life Sciences Congress 2019 (BODA, BRAIN, NTM, OMA, OMP)

  2. Chromatic serial multiphoton microscopy for high-content multiscale analysis of large brain volumes

    Optics InfoBase Conference Papers

  3. Chromatic serial multiphoton microscopy for multicolor imaging of large brain volumes

    Optics InfoBase Conference Papers

  4. Chromatic serial multiphoton microscopy for multicolor imaging of large brain volumes

    Progress in Biomedical Optics and Imaging - Proceedings of SPIE

  5. Multicolor multiscale brain imaging with chromatic multiphoton serial microscopy

    Nature Communications, Vol. 10, Núm. 1

  6. Publisher Correction: Multicolor multiscale brain imaging with chromatic multiphoton serial microscopy (Nature Communications, (2019), 10, 1, (1662), 10.1038/s41467-019-09552-9)

    Nature Communications

2015

  1. Crowdsourcing the creation of image segmentation algorithms for connectomics

    Frontiers in Neuroanatomy, Vol. 9, Núm. November, pp. 1-13

  2. Human-computer interaction and international public policymaking: A framework for understanding and taking future actions

    Foundations and Trends in Human-Computer Interaction, Vol. 9, Núm. 2, pp. 69-149

2014

  1. A survey of the parallel performance and accuracy of Poisson solvers for electronic structure calculations

    Journal of Computational Chemistry, Vol. 35, Núm. 6, pp. 427-444

2012

  1. Time-dependent density-functional theory in massively parallel computer architectures: The octopus project

    Journal of Physics Condensed Matter, Vol. 24, Núm. 23