Publications (61) JAVIER GARAIZAR CANDINA publications

2023

  1. Bacterial Genomics and Epidemiology

    Microorganisms

2022

  1. A Practical Bioinformatics Workflow for Routine Analysis of Bacterial WGS Data

    Microorganisms, Vol. 10, Núm. 12

  2. Anianabacter salinae gen. nov., sp. nov. ASV31T, a Facultative Alkaliphilic and Extremely Halotolerant Bacterium Isolated from Brine of a Millennial Continental Saltern

    Diversity, Vol. 14, Núm. 11

2021

  1. 1918 influenza microbiology: From Pfeiffer’s bacillus to the reconstruction of virus A H1N1 in cadavers in permafrost

    Gaceta Medica de Bilbao, Vol. 118, pp. S3-S10

  2. Altererythrobacter muriae sp. Nov., isolated from hypersaline Añana salt valley spring water, a continental thalassohaline-type solar saltern

    International Journal of Systematic and Evolutionary Microbiology, Vol. 71, Núm. 3

  3. Fungal diversity and composition of the continental solar saltern in añana salt valley (Spain)

    Journal of Fungi, Vol. 7, Núm. 12

  4. Hidrobio-geología del complejo sistema del diapiro de Añana (Araba)

    Geotemas (Madrid), Núm. 18, pp. 331

  5. Molecular epidemiology, antimicrobial surveillance, and pk/pd analysis to guide the treatment of neisseria gonorrhoeae infections

    Pharmaceutics, Vol. 13, Núm. 10

  6. Salmonella enterica 4,5,12:b:- serotipo berriaren karakterizazioa eta etxeko dortokekin erlazionatutako arriskua

    Ekaia: Euskal Herriko Unibertsitateko zientzi eta teknologi aldizkaria, Núm. 39, pp. 23-36

2020

  1. Genotyping study of Salmonella 4,[5],12: I: - Monophasic variant of serovar typhimurium and characterization of the second-phase flagellar deletion by whole genome sequencing

    Microorganisms, Vol. 8, Núm. 12, pp. 1-19

2018

  1. Antimicrobial susceptibility and MLVA analysis of S. Typhimurium strains isolated from human and poultry samples in Tunisia

    Journal of Infection in Developing Countries, Vol. 12, Núm. 5, pp. 313-320

  2. INNUENDO: A cross‐sectoral platform for the integration of genomics in the surveillance of food‐borne pathogens

    EFSA Supporting Publications, Vol. 15, Núm. 11

  3. Relationship between Salmonella infection, shedding and serology in fattening pigs in low–moderate prevalence areas

    Zoonoses and Public Health, Vol. 65, Núm. 5, pp. 481-489

  4. Salmonella enterica espeziearen andui monofasikoen karakterizazio molekularra eta epidemiologikoa

    Ekaia: Euskal Herriko Unibertsitateko zientzi eta teknologi aldizkaria, Núm. 1, pp. 65-76

  5. Virulotyping of Salmonella enterica serovar Typhi isolates from Pakistan: Absence of complete SPI-10 in Vi negative isolates

    PLoS Neglected Tropical Diseases, Vol. 12, Núm. 11

2016

  1. Draft genome sequence of an Oceanobacillus sp. strain isolated from soil in a burial crypt

    Genome Announcements, Vol. 4, Núm. 4

2015

  1. Aspergillus fumigatus transcriptome response to a higher temperature during the earliest steps of germination monitored using a new customized expression microarray

    Microbiology (United Kingdom), Vol. 161, Núm. 3, pp. 490-502

2014

  1. Identification of staphylococcal species based on variations in protein sequences (mass spectrometry) and DNA sequence (sodA microarray)

    Molecular and Cellular Probes, Vol. 28, Núm. 1, pp. 41-50

  2. Rapid and specific detection of section Fumigati and Aspergillus fumigatus in human samples using a new multiplex real-time PCR

    Diagnostic Microbiology and Infectious Disease, Vol. 80, Núm. 2, pp. 111-118

  3. Reprint of "Identification of staphylococcal species based on variations in protein sequences (mass spectrometry) and DNA sequence (sodA microarray)"

    Molecular and Cellular Probes, Vol. 28, Núm. 2-3, pp. 73-82