Argitalpenak (27) MIKEL EGAÑA ARANGUREN argitalpenak

2015

  1. Enhanced reproducibility of SADI web service workflows with Galaxy and Docker

    GigaScience, Vol. 4, Núm. 1

2014

  1. Automatically exposing OpenLifeData via SADI semantic Web Services

    Journal of Biomedical Semantics, Vol. 5, Núm. 1

  2. Executing SADI services in Galaxy

    Journal of Biomedical Semantics, Vol. 5, Núm. 1

  3. Nanopublishing clinical diagnoses: Tracking diagnostic knowledge base content and utilization

    Proceedings - IEEE Symposium on Computer-Based Medical Systems

  4. Special issue on linked data for health care and the life sciences

    Semantic Web, Vol. 5, Núm. 2, pp. 99-100

  5. Translational research combining orthologous genes and human diseases with the OGOLOD dataset

    Semantic Web, Vol. 5, Núm. 2, pp. 145-149

2013

  1. Evaluation of the OQuaRE framework for ontology quality

    Expert Systems with Applications, Vol. 40, Núm. 7, pp. 2696-2703

  2. OPPL-Galaxy, a Galaxy tool for enhancing ontology exploitation as part of bioinformatics workflows

    Journal of Biomedical Semantics, Vol. 4, Núm. 1

  3. Plant-Pathogen Interactions Ontology (PPIO)

    PROCEEDINGS IWBBIO 2013: INTERNATIONAL WORK-CONFERENCE ON BIOINFORMATICS AND BIOMEDICAL ENGINEERING

2012

  1. OPPL-Galaxy: Enhancing ontology exploitation in Galaxy with OPPL

    ACM International Conference Proceeding Series

  2. Ontology design pattern language expressivity requirements

    CEUR Workshop Proceedings

  3. Publishing orthology and diseases information in the Linked Open Data cloud

    Current Bioinformatics, Vol. 7, Núm. 3, pp. 255-266

2011

  1. Flexibility and utility of the cell cycle ontology

    Applied Ontology, Vol. 6, Núm. 3, pp. 247-261

  2. Semantic integration of information about orthologs and diseases: The OGO system

    Journal of Biomedical Informatics, Vol. 44, Núm. 6, pp. 1020-1031

2010

  1. A semantic query interface for the OGO platform

    Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics)

  2. Technologies and best practices for building bio-ontologies

    Knowledge-Based Bioinformatics: From Analysis to Interpretation (wiley), pp. 67-86

2009

  1. Augmenting the expressivity of the ontology pre-processor language

    CEUR Workshop Proceedings

  2. BioGateway: A semantic systems biology tool for the life sciences

    BMC Bioinformatics, Vol. 10, Núm. SUPPL. 10

  3. Structuring the life sciences resourceome for Semantic Systems Biology: Lessons from the biogateway project

    CEUR Workshop Proceedings

  4. The Cell Cycle Ontology: An application ontology for the representation and integrated analysis of the cell cycle process

    Genome Biology, Vol. 10, Núm. 5